Database : Fossorial water vole (Arvicola terrestris) population cycles and their phase-associated microbial communities

Access to data

Rights

Collection	Microma

Quotation

Petra Villette ; Eve Afonso ; Patrick Giraudoux (2020): Fossorial water vole (Arvicola terrestris) population cycles and their phase-associated microbial communities. Laboratoire Chrono-environnement (UMR 6249). doi:10.25666/DATAOSU-2017-02-03

General metadata

Identifier : local : FR-18008901306731-2017-02-03 external : doi:10.25666/DATAOSU-2017-02-03, doi:10.5281/zenodo.3784637

Description :

Monitoring of montane water vole populations on the Jura plateau during the phases of a demographic cycle: relative densities, reproduction parameters, weight, relative age (crystalline weight), and microbial community composition.

Those data have been collected in the framework of Petra Villette's doctorate.

Disciplines :

agronomy (applied biology - ecology), biodiversity conservation (applied biology - ecology), ecology (applied biology - ecology), microbiology (fundamental biology)

Keywords :

Jura, microbial communities, monitoring, population biology, population cycle, population dynamics, small mammals

Dates :

Data acquisition : from 4 Apr 2003 ongoing

Data provision : 1 May 2020

Metadata record :

Creation : 3 Feb 2017

Update : 26 Jun 2020

Update periodicity : as needed

Language : English (eng)

Audience : Research

Coverages

Spatial coverage :

Study area: latitude between 46° 55' 36" N and 46° 46' 12" N, longitude between 5° 59' 52" E and 6° 4' 19" E, between 671m and 870m of altitude

Time coverage :

2003-04-08 and after

Taxonomic coverage :

Species
Arvicola scherman (Montane water vole), Arvicola terrestris (European water vole)
Regnum
Bacteria (Bacteria)

Administrative metadata

Data creators	Affiliation
Petra Villette	Chrono-environnement (FRA)
Eve Afonso	Chrono-environnement (FRA)
Patrick Giraudoux	Chrono-environnement (FRA)

Contributors	Affiliation	Role
Nathalie Charbonnel	INRAE (FRA)	data collector
Yannick Chaval	INRAE (FRA)	data collector
Jean-François Cosson	INRAE (FRA)	data collector
Geoffroy Couval	FREDON (FRA)	data collector
Aurélien Levret	FREDON (FRA)	data collector

Publisher : Laboratoire Chrono-environnement (UMR 6249)

Label : Zone Atelier Arc Jurassien

Science contact : Petra Villette

Computing contact : Petra Villette

Access : available

Technical metadata

Formats : application/vnd.ms-excel, application/x-accdb, text/csv

Data acquisition methods :

Observational data :
Index transects, live trapping, dissection, high throughput generation sequencing, etc.

Datatype : Database

Publications

Consequences of organ choice in describing bacterial pathogen assemblages in a rodent population (doi:10.1017/S0950268817001893)
Spatial and Temporal Characteristics of Bacterial Parasite Communities in Outbreaking Fossorial Water Vole (Arvicola terrestris) Populations: Static Uniformity or Dynamic Heterogeneity? (https://www.theses.fr/2018UBFCD056)
Spatio-temporal trends in richness and persistence of bacterial communities in decline-phase water vole populations (doi:10.1038/s41598-020-66107-5)